Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm6855-201ENSMUST00000206307 790 ntBASIC7.83□□□□□ -1.16
Herc1E9PZP8 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm8856-201ENSMUST00000185254 1144 ntBASIC7.83□□□□□ -1.16
Herc1E9PZP8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm7211-201ENSMUST00000172692 1118 ntBASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm7985-201ENSMUST00000183329 981 ntBASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm37666-201ENSMUST00000194110 866 ntBASIC7.83□□□□□ -1.16
Herc1E9PZP8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Herc1E9PZP8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm13022-201ENSMUST00000121181 285 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm8712-201ENSMUST00000221090 701 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 AC123645.1-201ENSMUST00000228469 605 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm25072-201ENSMUST00000175233 235 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Herc1E9PZP8 Gm43908-201ENSMUST00000205074 1472 ntBASIC7.82□□□□□ -1.16
Herc1E9PZP8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm11930-201ENSMUST00000117788 190 ntBASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm5621-201ENSMUST00000187303 640 ntBASIC7.81□□□□□ -1.16
Herc1E9PZP8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm31256-201ENSMUST00000194705 506 ntBASIC7.81□□□□□ -1.16
Herc1E9PZP8 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
Herc1E9PZP8 Mir680-2-201ENSMUST00000102163 110 ntBASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm23251-201ENSMUST00000103773 110 ntBASIC7.81□□□□□ -1.16
Herc1E9PZP8 Gm13123-201ENSMUST00000122173 492 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms