Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Gm2423-201ENSMUST00000074863 733 ntBASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh17E9PXF0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm14719-201ENSMUST00000121891 340 ntBASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm5186-201ENSMUST00000218781 920 ntBASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Shd-206ENSMUST00000225145 998 ntBASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh17E9PXF0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh17E9PXF0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh17E9PXF0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms