Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a3E9PWQ3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gm29155-201ENSMUST00000185910 269 ntBASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a3E9PWQ3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm15276-201ENSMUST00000145953 498 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm17889-201ENSMUST00000198410 598 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm14726-201ENSMUST00000120623 896 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Gm8768-201ENSMUST00000220020 826 ntBASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a3E9PWQ3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Rmrp-201ENSMUST00000157463 271 ntBASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms