Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm28043E0CXC2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Gm12008-201ENSMUST00000117791 755 ntBASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28043E0CXC2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Gm5364-201ENSMUST00000216789 889 ntBASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28043E0CXC2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.41□□□□□ -0.1
Gm28043E0CXC2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms