Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm14042-201ENSMUST00000120139 833 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm8584-201ENSMUST00000171982 758 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm12887B1AVM1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.62□□□□□ -0.55
Gm12887B1AVM1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm8749-201ENSMUST00000117737 331 ntBASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm18489-201ENSMUST00000172565 551 ntBASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.61□□□□□ -0.55
Gm12887B1AVM1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.6□□□□□ -0.55
Gm12887B1AVM1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms