Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd3B1AR17 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Chd3B1AR17 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd3B1AR17 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd3B1AR17 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chd3B1AR17 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.05□□□□□ -0.16
Chd3B1AR17 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chd3B1AR17 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chd3B1AR17 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gm6916-202ENSMUST00000205523 195 ntBASIC14.05□□□□□ -0.16
Chd3B1AR17 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.05□□□□□ -0.16
Chd3B1AR17 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gm12585-201ENSMUST00000117307 290 ntBASIC14.05□□□□□ -0.16
Chd3B1AR17 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Chd3B1AR17 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.05□□□□□ -0.16
Chd3B1AR17 Gm10766-202ENSMUST00000194123 606 ntBASIC14.05□□□□□ -0.16
Chd3B1AR17 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.05□□□□□ -0.16
Chd3B1AR17 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd3B1AR17 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chd3B1AR17 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Chd3B1AR17 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Gm14042-201ENSMUST00000120139 833 ntBASIC14.04□□□□□ -0.16
Chd3B1AR17 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.04□□□□□ -0.16
Chd3B1AR17 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chd3B1AR17 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chd3B1AR17 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Chd3B1AR17 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.03□□□□□ -0.16
Chd3B1AR17 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd3B1AR17 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.03□□□□□ -0.16
Chd3B1AR17 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.03□□□□□ -0.16
Chd3B1AR17 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Gm15321-201ENSMUST00000121290 288 ntBASIC14.03□□□□□ -0.16
Chd3B1AR17 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chd3B1AR17 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chd3B1AR17 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms