Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav13d-4A0A0G2JFX3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm9726-201ENSMUST00000180321 678 ntBASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm28033-201ENSMUST00000184224 96 ntBASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.89□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav13d-4A0A0G2JFX3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms