Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
PdfS4R2K0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.05□□□□□ -0.64
PdfS4R2K0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Gm5864-201ENSMUST00000202263 970 ntBASIC11.05□□□□□ -0.64
PdfS4R2K0 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.05□□□□□ -0.64
PdfS4R2K0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
PdfS4R2K0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
PdfS4R2K0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.05□□□□□ -0.64
PdfS4R2K0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Grk6-207ENSMUST00000225925 2769 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm13884-201ENSMUST00000118103 829 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm18733-201ENSMUST00000173950 856 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm27867-201ENSMUST00000184778 125 ntBASIC11.04□□□□□ -0.64
PdfS4R2K0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
PdfS4R2K0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PdfS4R2K0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PdfS4R2K0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PdfS4R2K0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms