Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm19220-201ENSMUST00000222682 803 ntBASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf1Q9EPU4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Cpsf1Q9EPU4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf1Q9EPU4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cpsf1Q9EPU4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf1Q9EPU4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Gm3809-201ENSMUST00000180973 1006 ntBASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Gm18905-201ENSMUST00000205454 928 ntBASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Gm45384-201ENSMUST00000210451 277 ntBASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Gm17795-201ENSMUST00000214505 757 ntBASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf1Q9EPU4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cpsf1Q9EPU4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Gm7558-201ENSMUST00000193221 1165 ntBASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Gm45133-201ENSMUST00000207548 2773 ntBASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf1Q9EPU4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Gm8927-201ENSMUST00000181978 981 ntBASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Gm3222-201ENSMUST00000071282 990 ntBASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms