Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
U2af1Q9D883 AA619741-201ENSMUST00000195095 646 ntBASIC18.91■□□□□ 0.62
U2af1Q9D883 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
U2af1Q9D883 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.91■□□□□ 0.62
U2af1Q9D883 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
U2af1Q9D883 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
U2af1Q9D883 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
U2af1Q9D883 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2af1Q9D883 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
U2af1Q9D883 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
U2af1Q9D883 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.9■□□□□ 0.62
U2af1Q9D883 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
U2af1Q9D883 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
U2af1Q9D883 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.9■□□□□ 0.62
U2af1Q9D883 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
U2af1Q9D883 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1Q9D883 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2af1Q9D883 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2af1Q9D883 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2af1Q9D883 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gm27321-201ENSMUST00000185021 205 ntBASIC18.89■□□□□ 0.61
U2af1Q9D883 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.89■□□□□ 0.61
U2af1Q9D883 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.89■□□□□ 0.61
U2af1Q9D883 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
U2af1Q9D883 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1Q9D883 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Gm15653-201ENSMUST00000119247 907 ntBASIC18.88■□□□□ 0.61
U2af1Q9D883 Gm14057-201ENSMUST00000120631 482 ntBASIC18.88■□□□□ 0.61
U2af1Q9D883 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
U2af1Q9D883 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1Q9D883 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1Q9D883 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
U2af1Q9D883 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms