Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Gm45612-201ENSMUST00000211320 160 ntBASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc7Q9D541 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Mir3113-201ENSMUST00000175478 76 ntBASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Gm27741-201ENSMUST00000185060 237 ntBASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc7Q9D541 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Gm10175-201ENSMUST00000086013 645 ntBASIC16.79■□□□□ 0.28
Ccdc7Q9D541 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc7Q9D541 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc7Q9D541 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc7Q9D541 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc7Q9D541 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc7Q9D541 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc7Q9D541 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms