Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
4930553M12RikQ9CUH1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
4930553M12RikQ9CUH1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gm9824-201ENSMUST00000178707 561 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
4930553M12RikQ9CUH1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm14701-201ENSMUST00000117156 348 ntBASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm24158-201ENSMUST00000175263 71 ntBASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm10253-201ENSMUST00000194270 940 ntBASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm18049-201ENSMUST00000208909 581 ntBASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
4930553M12RikQ9CUH1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
4930553M12RikQ9CUH1 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms