Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nipsnap3bQ9CQE1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm16198-201ENSMUST00000118766 670 ntBASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Olfr286-202ENSMUST00000205305 969 ntBASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nipsnap3bQ9CQE1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm18195-201ENSMUST00000207604 706 ntBASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nipsnap3bQ9CQE1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm12350-201ENSMUST00000121208 462 ntBASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Nipsnap3bQ9CQE1 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms