Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.1□□□□□ -0.15
Trim16Q99PP9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.1□□□□□ -0.15
Trim16Q99PP9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.1□□□□□ -0.15
Trim16Q99PP9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim16Q99PP9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.09□□□□□ -0.15
Trim16Q99PP9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.09□□□□□ -0.15
Trim16Q99PP9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Trim16Q99PP9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trim16Q99PP9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm11594-201ENSMUST00000122313 162 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.08□□□□□ -0.16
Trim16Q99PP9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim16Q99PP9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms