Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.3□□□□□ -0.12
Trim33Q99PP7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Rprl2-201ENSMUST00000157150 290 ntBASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.3□□□□□ -0.12
Trim33Q99PP7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.3□□□□□ -0.12
Trim33Q99PP7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim33Q99PP7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm18057-201ENSMUST00000208220 503 ntBASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm2594-201ENSMUST00000214774 742 ntBASIC14.29□□□□□ -0.12
Trim33Q99PP7 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.29□□□□□ -0.12
Trim33Q99PP7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim33Q99PP7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm11543-201ENSMUST00000120758 370 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm13365-201ENSMUST00000121188 973 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm27920-201ENSMUST00000183953 96 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim33Q99PP7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.28□□□□□ -0.12
Trim33Q99PP7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms