Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim8Q99PJ2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Gm18195-201ENSMUST00000207604 706 ntBASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim8Q99PJ2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Gm11764-201ENSMUST00000120221 623 ntBASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim8Q99PJ2 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.1□□□□□ -0.15
Trim8Q99PJ2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms