Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gm18307-201ENSMUST00000206864 949 ntBASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gm40466-201ENSMUST00000212174 422 ntBASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.87□□□□□ -0.03
Col25a1Q99MQ5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col25a1Q99MQ5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Gm2383-201ENSMUST00000181461 807 ntBASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.85□□□□□ -0.03
Col25a1Q99MQ5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms