Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm18307-201ENSMUST00000206864 949 ntBASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-1Q99MA9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-1Q99MA9 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-1Q99MA9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gm13392-201ENSMUST00000117708 150 ntBASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gm9726-201ENSMUST00000180321 678 ntBASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Gm17794-201ENSMUST00000220252 955 ntBASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-1Q99MA9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms