Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Gm14494-201ENSMUST00000118786 435 ntBASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Gm2272-201ENSMUST00000194903 582 ntBASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp1b1Q99LU0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm16198-201ENSMUST00000118766 670 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm27301-201ENSMUST00000184012 127 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm5867-201ENSMUST00000063197 592 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chmp1b1Q99LU0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms