Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Mir1938-201ENSMUST00000158746 100 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Gm27701-201ENSMUST00000184498 110 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.54■□□□□ 0.24
Rfc4Q99J62 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfc4Q99J62 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.53■□□□□ 0.24
Rfc4Q99J62 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Gm5035-201ENSMUST00000215581 927 ntBASIC16.53■□□□□ 0.24
Rfc4Q99J62 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.53■□□□□ 0.24
Rfc4Q99J62 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfc4Q99J62 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm12341-201ENSMUST00000119724 503 ntBASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm28911-201ENSMUST00000188837 117 ntBASIC16.52■□□□□ 0.24
Rfc4Q99J62 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.52■□□□□ 0.24
Rfc4Q99J62 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfc4Q99J62 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.52■□□□□ 0.23
Rfc4Q99J62 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rfc4Q99J62 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfc4Q99J62 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfc4Q99J62 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.52■□□□□ 0.23
Rfc4Q99J62 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfc4Q99J62 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Gm10275-202ENSMUST00000168697 495 ntBASIC16.51■□□□□ 0.23
Rfc4Q99J62 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.51■□□□□ 0.23
Rfc4Q99J62 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Gm10275-201ENSMUST00000092620 635 ntBASIC16.51■□□□□ 0.23
Rfc4Q99J62 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms