Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm24169-201ENSMUST00000180244 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm23689-201ENSMUST00000180354 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm27359-201ENSMUST00000184153 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm27785-201ENSMUST00000184268 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm27466-201ENSMUST00000184396 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm27703-201ENSMUST00000184836 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Gm10253-201ENSMUST00000194270 940 ntBASIC15.07■□□□□ 0
Pcdha3Q91Y16 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.07■□□□□ 0
Pcdha3Q91Y16 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdha3Q91Y16 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.06■□□□□ 0
Pcdha3Q91Y16 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdha3Q91Y16 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdha3Q91Y16 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Gm9824-201ENSMUST00000178707 561 ntBASIC15.05■□□□□ -0
Pcdha3Q91Y16 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.05■□□□□ -0
Pcdha3Q91Y16 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.05■□□□□ -0
Pcdha3Q91Y16 Gm9182-201ENSMUST00000217829 639 ntBASIC15.05■□□□□ -0
Pcdha3Q91Y16 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.05■□□□□ -0
Pcdha3Q91Y16 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms