Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Gm18889-201ENSMUST00000174284 929 ntBASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb1Q91Y08 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm13365-201ENSMUST00000121188 973 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb1Q91Y08 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb1Q91Y08 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms