Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga6Q91XY2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Gm43630-201ENSMUST00000201550 776 ntBASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Gm6266-201ENSMUST00000203844 806 ntBASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga6Q91XY2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Gm45668-201ENSMUST00000211271 493 ntBASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga6Q91XY2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga6Q91XY2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms