Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkd2Q8VE28 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Gm18737-201ENSMUST00000173594 937 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Gm10154-201ENSMUST00000084445 354 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Carlr-201ENSMUST00000181515 2574 ntBASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkd2Q8VE28 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nkd2Q8VE28 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Nkd2Q8VE28 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkd2Q8VE28 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkd2Q8VE28 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nkd2Q8VE28 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkd2Q8VE28 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.14□□□□□ -0.31
Nkd2Q8VE28 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms