Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx39aQ8VDW0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Gm9522-201ENSMUST00000182394 926 ntBASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx39aQ8VDW0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 BC001981-202ENSMUST00000191393 1545 ntBASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Gm10275-202ENSMUST00000168697 495 ntBASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Gm10275-201ENSMUST00000092620 635 ntBASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx39aQ8VDW0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.96■□□□□ 0.14
Ddx39aQ8VDW0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ddx39aQ8VDW0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ddx39aQ8VDW0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ddx39aQ8VDW0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ddx39aQ8VDW0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ddx39aQ8VDW0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Gm12859-201ENSMUST00000117834 427 ntBASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.94■□□□□ 0.14
Ddx39aQ8VDW0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms