Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cuedc1Q8R3V6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Gm6888-201ENSMUST00000221983 706 ntBASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cuedc1Q8R3V6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Gm14767-201ENSMUST00000121559 586 ntBASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cuedc1Q8R3V6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cuedc1Q8R3V6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.15□□□□□ -0.31
Cuedc1Q8R3V6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Cuedc1Q8R3V6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cuedc1Q8R3V6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms