Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zcchc9Q8R1J3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Celf4-206ENSMUST00000224553 1729 ntBASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zcchc9Q8R1J3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zcchc9Q8R1J3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms