Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Gm37008-201ENSMUST00000195712 319 ntBASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Gm7993-201ENSMUST00000200970 1384 ntBASIC18.68■□□□□ 0.58
Ddx54Q8K4L0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Gm22018-201ENSMUST00000104357 131 ntBASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx54Q8K4L0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Gm43068-201ENSMUST00000201095 1273 ntBASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx54Q8K4L0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Gm15371-201ENSMUST00000117057 784 ntBASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Gm8810-201ENSMUST00000172895 754 ntBASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx54Q8K4L0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx54Q8K4L0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx54Q8K4L0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx54Q8K4L0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx54Q8K4L0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx54Q8K4L0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Mir7070-201ENSMUST00000183657 86 ntBASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Gm43118-201ENSMUST00000199149 775 ntBASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Gm17823-201ENSMUST00000217830 1006 ntBASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Mir433-201ENSMUST00000093564 124 ntBASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx54Q8K4L0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms