Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf4Q8K4J2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm15165-201ENSMUST00000118140 502 ntBASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf4Q8K4J2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Gm27867-201ENSMUST00000184778 125 ntBASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Gm8655-201ENSMUST00000221159 852 ntBASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf4Q8K4J2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms