Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm44608-201ENSMUST00000206827 855 ntBASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox30Q8CGW4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Sox30Q8CGW4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox30Q8CGW4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Gm25925-201ENSMUST00000158314 306 ntBASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Rpph1-201ENSMUST00000175096 319 ntBASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Mir5131-201ENSMUST00000175426 93 ntBASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox30Q8CGW4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Gm18041-201ENSMUST00000218210 618 ntBASIC15.68■□□□□ 0.1
Sox30Q8CGW4 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox30Q8CGW4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms