Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.79■□□□□ 0.44
Smc5Q8CG46 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc5Q8CG46 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smc5Q8CG46 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.78■□□□□ 0.44
Smc5Q8CG46 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc5Q8CG46 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.77■□□□□ 0.44
Smc5Q8CG46 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.77■□□□□ 0.44
Smc5Q8CG46 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.77■□□□□ 0.44
Smc5Q8CG46 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc5Q8CG46 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc5Q8CG46 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.76■□□□□ 0.43
Smc5Q8CG46 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc5Q8CG46 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.75■□□□□ 0.43
Smc5Q8CG46 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Smc5Q8CG46 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms