Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Gm18737-201ENSMUST00000173594 937 ntBASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Gm10253-201ENSMUST00000194270 940 ntBASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc178Q8CDV0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm2810-201ENSMUST00000118681 990 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc178Q8CDV0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms