Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm5864-201ENSMUST00000202263 970 ntBASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tsen54Q8C2A2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tsen54Q8C2A2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Gm6376-201ENSMUST00000209407 580 ntBASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tsen54Q8C2A2 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm8097-201ENSMUST00000117903 829 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm11452-201ENSMUST00000122376 690 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms