Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Gm4804-201ENSMUST00000182234 999 ntBASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp40Q8BWR4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp40Q8BWR4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Usp40Q8BWR4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Usp40Q8BWR4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp40Q8BWR4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Gm37714-201ENSMUST00000194742 342 ntBASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Gm18187-201ENSMUST00000196476 984 ntBASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Gm5279-201ENSMUST00000199575 745 ntBASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usp40Q8BWR4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gm15678-201ENSMUST00000117573 960 ntBASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gm12341-201ENSMUST00000119724 503 ntBASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Gm17795-201ENSMUST00000214505 757 ntBASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp40Q8BWR4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Gm11478-201ENSMUST00000117851 599 ntBASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Gm14127-201ENSMUST00000117906 678 ntBASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp40Q8BWR4 Gm43438-201ENSMUST00000198133 379 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms