Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm14042-201ENSMUST00000120139 833 ntBASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm3436-201ENSMUST00000179930 840 ntBASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm27838-201ENSMUST00000184829 128 ntBASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Mir125a-201ENSMUST00000083545 68 ntBASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdk5rap1Q8BTW8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm15487-201ENSMUST00000122373 465 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdk5rap1Q8BTW8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms