Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Gm45612-201ENSMUST00000211320 160 ntBASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4Q8BQZ5 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Gm11025-201ENSMUST00000140773 466 ntBASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4Q8BQZ5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm13365-201ENSMUST00000121188 973 ntBASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm11745-201ENSMUST00000121669 448 ntBASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpsf4Q8BQZ5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms