Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm25016-201ENSMUST00000158399 131 ntBASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm27867-201ENSMUST00000184778 125 ntBASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.86□□□□□ -0.51
Smco3Q8BQM7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gm15358-201ENSMUST00000119249 520 ntBASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco3Q8BQM7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Mir6982-201ENSMUST00000184354 68 ntBASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gm8655-201ENSMUST00000221159 852 ntBASIC11.84□□□□□ -0.51
Smco3Q8BQM7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.84□□□□□ -0.51
Smco3Q8BQM7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco3Q8BQM7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms