Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm8810-201ENSMUST00000172895 754 ntBASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm19184-201ENSMUST00000196798 928 ntBASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm45930-201ENSMUST00000221330 292 ntBASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col16a1Q8BLX7 Gm10327-201ENSMUST00000105222 1002 ntBASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Gm38002-201ENSMUST00000193255 180 ntBASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col16a1Q8BLX7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Gm10156-201ENSMUST00000122364 462 ntBASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col16a1Q8BLX7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm15371-201ENSMUST00000117057 784 ntBASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm7584-201ENSMUST00000175829 940 ntBASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm38223-201ENSMUST00000194484 695 ntBASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm43818-201ENSMUST00000200605 466 ntBASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col16a1Q8BLX7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Gm15236-201ENSMUST00000117309 379 ntBASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Gm2445-201ENSMUST00000182798 989 ntBASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms