Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gm9385-201ENSMUST00000117563 472 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gm18737-201ENSMUST00000173594 937 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gm9726-201ENSMUST00000180321 678 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Matn2-206ENSMUST00000228570 2798 ntBASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn3Q8BHH8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Gm45612-201ENSMUST00000211320 160 ntBASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.53□□□□□ -0.24
Clrn3Q8BHH8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clrn3Q8BHH8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm11543-201ENSMUST00000120758 370 ntBASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm11025-201ENSMUST00000140773 466 ntBASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm9182-201ENSMUST00000217829 639 ntBASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms