Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ubp1Q811S7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.21□□□□□ -0.13
Ubp1Q811S7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ubp1Q811S7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ubp1Q811S7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ubp1Q811S7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ubp1Q811S7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.2□□□□□ -0.14
Ubp1Q811S7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Gm20614-201ENSMUST00000177106 632 ntBASIC14.2□□□□□ -0.14
Ubp1Q811S7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.2□□□□□ -0.14
Ubp1Q811S7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ubp1Q811S7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.19□□□□□ -0.14
Ubp1Q811S7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.19□□□□□ -0.14
Ubp1Q811S7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.19□□□□□ -0.14
Ubp1Q811S7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ubp1Q811S7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Gm25287-201ENSMUST00000103846 110 ntBASIC14.18□□□□□ -0.14
Ubp1Q811S7 Gm22918-201ENSMUST00000103855 110 ntBASIC14.18□□□□□ -0.14
Ubp1Q811S7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Gm7774-201ENSMUST00000200064 533 ntBASIC14.18□□□□□ -0.14
Ubp1Q811S7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubp1Q811S7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms