Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.69□□□□□ -0.06
Ddx42Q810A7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.69□□□□□ -0.06
Ddx42Q810A7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.69□□□□□ -0.06
Ddx42Q810A7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.69□□□□□ -0.06
Ddx42Q810A7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ddx42Q810A7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.68□□□□□ -0.06
Ddx42Q810A7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.68□□□□□ -0.06
Ddx42Q810A7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.68□□□□□ -0.06
Ddx42Q810A7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx42Q810A7 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.68□□□□□ -0.06
Ddx42Q810A7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.67□□□□□ -0.06
Ddx42Q810A7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx42Q810A7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.66□□□□□ -0.06
Ddx42Q810A7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.66□□□□□ -0.06
Ddx42Q810A7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.66□□□□□ -0.06
Ddx42Q810A7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx42Q810A7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx42Q810A7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms