Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh19Q80TF3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdh19Q80TF3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Gm7775-201ENSMUST00000218871 853 ntBASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh19Q80TF3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh19Q80TF3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms