Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh8Q7TSK3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh8Q7TSK3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh8Q7TSK3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm9726-201ENSMUST00000180321 678 ntBASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm9063-201ENSMUST00000223299 582 ntBASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh8Q7TSK3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh8Q7TSK3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms