Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn4bQ7M729 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn4bQ7M729 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm24513-201ENSMUST00000174964 138 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm27397-201ENSMUST00000184997 107 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm37935-201ENSMUST00000192012 982 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm2756-201ENSMUST00000195851 400 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.02□□□□□ -0.17
Scn4bQ7M729 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn4bQ7M729 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.01□□□□□ -0.17
Scn4bQ7M729 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.01□□□□□ -0.17
Scn4bQ7M729 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.01□□□□□ -0.17
Scn4bQ7M729 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.01□□□□□ -0.17
Scn4bQ7M729 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn4bQ7M729 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn4bQ7M729 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn4bQ7M729 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Scn4bQ7M729 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn4bQ7M729 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scn4bQ7M729 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms