Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ssx9Q6XAS3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssx9Q6XAS3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssx9Q6XAS3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms