Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm25668-201ENSMUST00000157700 129 ntBASIC12.1□□□□□ -0.47
Rif1Q6PR54 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm44545-201ENSMUST00000208262 746 ntBASIC12.1□□□□□ -0.47
Rif1Q6PR54 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm14130-201ENSMUST00000118417 987 ntBASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rif1Q6PR54 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm22331-201ENSMUST00000158066 136 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm5051-201ENSMUST00000204085 485 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm18212-201ENSMUST00000211678 889 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.09□□□□□ -0.47
Rif1Q6PR54 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rif1Q6PR54 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rif1Q6PR54 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms