Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nup98Q6PFD9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Gm4984-201ENSMUST00000115987 360 ntBASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.69■□□□□ 0.26
Nup98Q6PFD9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Gm13226-201ENSMUST00000117838 404 ntBASIC16.68■□□□□ 0.26
Nup98Q6PFD9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup98Q6PFD9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Gm6152-201ENSMUST00000151704 340 ntBASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Nup98Q6PFD9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup98Q6PFD9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms