Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Gm15957-201ENSMUST00000118893 974 ntBASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snrnp40Q6PE01 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Gm13226-201ENSMUST00000117838 404 ntBASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Snrnp40Q6PE01 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Snrnp40Q6PE01 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Snrnp40Q6PE01 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms