Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd4Q6PDQ2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.46■□□□□ 0.54
Chd4Q6PDQ2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Gm17794-201ENSMUST00000220252 955 ntBASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd4Q6PDQ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd4Q6PDQ2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Gm18473-201ENSMUST00000220543 868 ntBASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms