Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.33■□□□□ 0.04
ShbQ6PD21 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gm26927-201ENSMUST00000182385 965 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.33■□□□□ 0.04
ShbQ6PD21 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gm24447-201ENSMUST00000083977 338 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.33■□□□□ 0.04
ShbQ6PD21 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShbQ6PD21 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ShbQ6PD21 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm12997-201ENSMUST00000120207 640 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm13786-201ENSMUST00000122371 333 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm29396-201ENSMUST00000185659 716 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.32■□□□□ 0.04
ShbQ6PD21 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShbQ6PD21 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ShbQ6PD21 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ShbQ6PD21 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ShbQ6PD21 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.31■□□□□ 0.04
ShbQ6PD21 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.31■□□□□ 0.04
ShbQ6PD21 Gm8227-201ENSMUST00000223306 571 ntBASIC15.31■□□□□ 0.04
ShbQ6PD21 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.31■□□□□ 0.04
ShbQ6PD21 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.31■□□□□ 0.04
ShbQ6PD21 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShbQ6PD21 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.31■□□□□ 0.04
ShbQ6PD21 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ShbQ6PD21 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShbQ6PD21 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms